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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted … Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting … Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … and floods. The planet’s resources are being stretched by a growing human population and increasing demand for … gene expression in that set, implicated in AMF interactions, was dramatically reduced as a result of …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … from Chlamydomonas reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA … understand a special class of compounds, or secondary metabolites, called terpenes. Terpenes are made via a … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … Institute is a DOE Bioenergy Research Center managed by Berkeley Lab. For more information, please visit  …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Learning to Look
Machine learning approach significantly expands inovirus … July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … itself within a host can lead to beneficial or antagonistic interactions with other co-infecting phages and with the …
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JGI@25: The Little Alga That Could
… 7,000 genes with other organisms (a third of those shared by both humans and flowering plants). Its genome also … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome …
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10 From JGI on the 2019 Highly Cited Researchers List
… formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … the Methodology section as “those that rank in the top 1% by citations for papers published and cited between …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … scientists to study microorganisms that can’t be cultured by analyzing and then extrapolating data obtained from … that are available these days and that are widely used by many, many scientists.”  Using samples of rumen-digested …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … is depth stratified, rainfall dependent, and is mediated by genomically divergent microorganisms. Nature Microbiology … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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