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A Plantiful Future: Xiaohan Yang
Can plants help humans attain a renewable energy future? Can they help lock away more … that using gene editing technology to conscientiously mix traits of different plant species will help us get there. …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … in this area, by means of theoretical lectures and seminars as well as practical hands-on sessions in bioinformatics and …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum … made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, etc. — to its …
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Crops as Tough as World Cup Turf
In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists … Guangchao Sun and Vladimir Torrres have looked into traits that could transfer from grasses into other crops.  …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. … designed to attract specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the … by protein in vitro expression and mass spectrometry-based enzyme activity assay. The work was  reported in  The …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with …
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Trent Northen
Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research … McGivern BB et al. Decrypting bacterial polyphenol metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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Marine Microbe Contains Multitudes
The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific Subtropical Gyre, microbes … environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted … transforming, and respiring carbon. Understanding the metabolisms that SAR324 and other microbes use could inform …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Three Join the JGI User Executive Committee
Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of … and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the … user facility operations and expertise in mass-spectrometry-based metabolomics and lipidomics to make recommendations to …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … they often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part of the … By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) … the world. We work with start-ups and mature companies, as long as the data are not proprietary. In addition, the … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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