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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … especially here in California. The opportunity to tap into the diverse talent that UC Merced has is tremendous for … graduate student summer research experience at the JGI, the Genomics Internship Program expanded to include UC Merced …
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Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae
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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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Metabolic characterization of anaerobic fungi provides a path forward for bioprocessing of crude lignocellulose
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven … Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my …
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iPHoP: A Matchmaker for Phages and their Hosts
… viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these … iPHoP program brings several of these approaches together into the same workflow, then uses a machine-learning model … The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a …
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