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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the … So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put … Mendota. In this episode: the software evolution that made metagenome assemblies like this possible. …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … Lab). And one of the tools that researchers can apply to study the transcription factors that control how genes are … DAP-seq and multiDAP allows for ultra high throughput discovery of transcription factor binding sites across many …
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Triggering Morel Fruiting
… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying … an artificial environment. It is particularly helpful for studying physiological and biochemical processes driving the …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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