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Measurement of bacterial replication rates in microbial communities
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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Missing microbial eukaryotes and misleading meta-omic conclusions
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Maast: genotyping thousands of microbial strains efficiently
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A metagenomic perspective on the microbial prokaryotic genome census
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Overview of Laboratory Workflows for Microbial Single-Cell Genomics
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …
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The Expanding Universe of Methane Metabolisms in Archaea
… atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … building high performance user interfaces and backend data systems. Trying to maintain v12’s codebase and legacy data resources and hardware, while also developing a modern and …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz … ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a DTRA-funded …
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