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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …
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Effects of Polar Light Cycle on Microbial Food Web
… evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … here. Understanding this fundamental difference offers new insight into the primary producers fueling our planet’s … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … nutrient flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … production. Building on the framework provided by our new switchgrass manuscript , we plan to use existing data as well as generating additional genomic resources to …
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2023 Progress Report
… we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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Evolution of a Fungal Gene Expression Regulator
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … Robert Schmitz at the University of Georgia and including JGI researchers conducted the largest analysis to date of … of specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference …
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Decoding Yellowstone’s Microbial Mats
… mats. Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from single cells and …
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Nikos Kyrpides
… focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for … analysis, as well as mining and visualization of big data. …
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