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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … advancements that facilitate the shift from uncovering microbial novelties to deciphering metabolic and functional …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received … was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … and evolutionary drivers of virus-host dynamics in soil microbial communities. … B.S. in Microbiology, Université …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … 116 (52) 27124-27132 Sasse, et. al.J. 2019 Multilab EcoFAB study shows highly reproducible physiology and depletion of …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the plant’s genome … a longtime JGI collaborator and a senior author on this study. The use of switchgrass as a feedstock for …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of these microbes. The Impact This study illustrates how the research community brings together …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … as multiple copies across the chromosomes. In a follow-up study , researchers focused on two types of naturally … JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving fungal rust pathogen …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention …
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which …
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