Search

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … in the continental United States. They also provided multiple access points to the information. The team … resource that provides information at multiple scales from genes to the community level. The Impact Rivers are …

… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back … see as the overall “theme” of your research? I know you’ve generally worked in various marine organisms. Except during …

… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) … The ability to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise …

… SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This episode, Rex Malmstrom …

… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses generated from mining genomic data by designing and …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . … non-flagellated terrestrial fungi suggested that there were multiple flagellum loss events during the diversification of …

… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in biomass each year … methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … organisms (symbionts) are transmitted between host generations, researchers investigated the role that bacteria … , is recognized as a mutualist, where both species of organism benefit from association, but was predicted to …

… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA … can make phenazines, and which microbes are most capable of generating phenazine production.” This led to them …

… and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a … The Impact The initial analysis highlights abundances of gene annotations that provide insights into the nutrients …