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… strains. (Blake Rasor) Think of cells as tiny factories: within their walls they have both the machinery to make … University describe a two-pronged approach that starts with engineered yeast cells but then moves out of the cell … products in industry.” From Cell to “Soup” The work started with yeast strains engineered by Alper’s team to convert the …

… that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean occurring within the last 40,000 years. The Impact Eelgrass represents … normally craft a genetic clock based on its divergence with a  different species. However, eelgrass didn’t have a …

… a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome … on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in marine and … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …

… managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using … — illuminating the molecular mechanisms for adaptation within the trees. The data set generated is 25 terabytes in …

… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … set of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … plants are studied? Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to …

… not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … is based on a model that is not based on a genome model with PhycoCosm, how do we go about getting it in your … on the gene model, that should be ok generally. We can work with you to re-map the data. If your rna-seq data doesn’t …

… Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … are currently limited to: Public data: datasets associated with completed projects that are eligible for public … + annotations) For IMG & Mycocosm: Data that is associated with an ITS project ID (AP or SP) Q: What JGI Data Policy …

… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … metric tons . The global chocolate brands couldn’t exist without cocoa.  But today the plant is under threat due to … of the world’s largest buyers of cocoa, is collaborating with others to develop healthier and more productive cacao …

… genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … Plant Breeding Research (MPIPZ) studied how fungi associate with roots in A. thaliana plants. The work also involved … of the key community participants and enabling future metagenomics studies.   …