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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… University in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … emphasized, the contributions of the numerous JGI science users in collecting and submitting their microbiome samples …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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JGI@25: Fueling Investigation into Methane-Making Microbes
… of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… sequences. Roux was first author on a study featuring a new program called iPHoP , which combines and evaluates multiple …
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JGI@25: Studying Sorghum’s Survival Skills
… of sorghum begins. Enabled by the JGI’s Community Science Program, Todd Mockler and his team collect diverse lines of … have also been sequenced, and the EPICON studies are still informing work on sorghum’s drought tolerance.     …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search for and find 13 … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab describes the effort …
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Help from Citrus’ Bitter, Hardier Cousin
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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JGI Hosts GPU Hackathon in May
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … the JGI hackathon is particularly focused on developing bioinformatics applications instead of on simulation codes. … has a strong reputation in the community,” said JGI Chief Informatics Officer Kjiersten Fagnan of the upcoming event. …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … playing key roles in regulating global nutrient cycles. The information gained from understanding the interactions … publicly available in the National Center for Biotechnology Information (NCBI) GenBank collection and on the JGI’s  …
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Evolution of a Fungal Gene Expression Regulator
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the … Resource Center (GACRC) and Georgia Genomics and Bioinformatics Core (GGBC) at the University of Georgia …
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