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… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …

… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …

… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … Short Palindromic Repeats) is the leading tool for accurately editing genomes, its effectiveness has …

… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the … that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …

JGI innovates protocol revealing how genetic variations in … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies … multicellular development. “DAP-Seq is the main source of information in the project,” Nagy added. “Since the FUNCODE is …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … them to diverse conditions is a time-consuming process. Successfully accomplishing this requires a diverse team of … the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant …

Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The vision … the JGI is to provide the global research community with access to the most advanced integrative genome science …

Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The … corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that maize … genes. And they transferred genes of interest to tobacco ( Nicotiana benthamiana ), giving the plant the ability …

As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students … at UC Merced. CAMP is a statewide initiative funded by the National Science Foundation (NSF) and supports …

… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … Berkeley National Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … States. They also provided multiple access points to the information. The team harnessed a community-science program to …

The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean … in the December 2024 review. You can also find more information about the JGI’s various proposal calls here. …