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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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JGI on the 2020 Highly Cited Researchers List
… released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  … classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part … of a team that  released a reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis …
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The Big Deal About Short Plants
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Emiley Eloe-Fadrosh
… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … Eloe-Fadrosh EA, et al. 2016. Global metagenomic survey reveals a new bacterial candidate phylum in geothermal … Program; NSF Postdoctoral Fellowship Program; Genome Canada Large-Scale Applied Research Project Competition; NASA …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… for mapping these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … research community with advanced genomic capabilities, large scale data, and professional expertise while … with the JGI through approved proposals; there’s a much larger community of people who use JGI-produced data for …
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Publication Policy
… interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak … (NERSC) has another supercomputer, Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is …
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Anna Ratner
Anna is working on the display and visualization of large omics data. …
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Creating an Energy Market for Miscanthus
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