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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other … assemble and interpret. The workshop aimed to showcase how researchers are utilizing deep learning to automatically … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … extremely important for polar phytoplankton.  After peering into the function and activity of phytoplankton genes and … looking at how communities of these microalgae interact, researchers have found that polar algae rely on dissolved …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… – Launching & Sustaining Startups in Synthetic Biology Who’s Invited? All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A followed by: 4:15 pm – 5:30 pm: Hosted Hoppy Hour @ Calicraft …
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Triggering Morel Fruiting
… a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … as plant litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from … uncultivable wild mushrooms, until Ronald D. Ower, a researcher from San Francisco State University, developed a …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By … October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united the genomics … out the building.  We don’t want to just throw everything into the landfill, we need to be able to divert it …
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Webinar: SIP technologies at EMSL and JGI
… microbes assimilating labeled compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom … A: As long as we can harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: No. We cannot take radioactive isotopes into EMSL and use them on the instruments because it has a …
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Promoting the Power of Viral Metagenomics
… the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , was  recently published in the journal  Annual Review of … to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils … of sustaining food and bioenergy security for a steadily growing worldwide population. Anuvia Plant Nutrients , a small … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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An Earth Month Look at Sustainability Efforts at the JGI
… of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a … in lab spaces as well as offices. These efforts dovetail into sustainability commitments for the wider Berkeley Lab. … lot of groundwork laid in Walnut Creek before people moved into the new building,” Fulton said. For example, even …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source … often by starting with identifying the right ingredients. Researchers collaborating across multiple institutions have … gasoline gallons if target yields could be achieved. Researchers at many national laboratories are working toward …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do … tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses can affect their prey … sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. Department of Energy (DOE) Joint …
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