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Frederik Schulz
… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and … and phylogenomics) and machine learning to find novel functions that may impact microbiome structure and …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers used … metabolites and helping them identify and describe the functions of the biosynthetic gene clusters that produce …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular functions. It plays an important role in regulating …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. …
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Pests, diseases, and aridity have shaped the genome of Corymbia citriodora
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Adaptive pangenomic remodeling in the Azolla cyanobiont amid a transient microbiome
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … to better understand how these hydrothermal ecosystems function in such extreme conditions. They identified 511 new … of certain nutrients — influence the makeup and functioning of a given microbial community. Scientists with …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … Quantitative and Systems Biology Mentor: Ernst Oberortner, Functional Genomics What effect has your summer internship …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … so you can download sequences, annotations, and gene structures. These genomes’ organism info pages will not be …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. … and how molecular processes within and outside of these structures occur and are regulated  also remain to be …
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to develop … Publications … Selected Publications …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … Joint Genome Institute after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the Operations … planning related to the JGI’s infrastructure and business functions. He acts as a resource and provides advice and …
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