Results

Machine Learning Reveals Signatures of Promiscuous Microbial Amidases for Micropollutant Biotransformations
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The Marchantia polymorpha pangenome reveals ancient mechanisms of plant adaptation to the environment
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High-density CRISPRi screens reveal diverse routes to improved acclimation in cyanobacteria.
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Metagenomics Reveal Dynamic Coastal Ocean Reservoir of Antibiotic Resistance Genes
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CRAGE-RB-PI-seq reveals transcriptional dynamics of plant-associated bacteria during root colonization
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Pangenome analysis of Liriodendron reveals presence/absence variations associated with growth traits
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center … data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. Sarah:  …
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Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … of sorts at the Lab. “This project represents part of our long term efforts to contribute towards a diverse workforce … relevant are service and respect, and I live these values by being able to pass along my knowledge to them as best as …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) Joint Genome … “All the microorganisms that we have been studying for a long time have really complicated pathways to make methane,” …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … and seven graduate students from UC Merced through their long standing internship program. In just two months, the … research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds …
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