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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Computing Sciences site. Lawrence Berkeley National Laboratory (Berkeley Lab), the National Energy Research Scientific … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… Collaborative Genome Science” – through early introduction to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, technology, … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … whole genome sequence data was funded by the BBSRC Core Strategic Programme in Resilient Crops: Miscanthus, …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced … with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop presentation skills as well as …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – …
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A Plantiful Future: Xiaohan Yang
… Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of different plant species will help us get there. …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … data usage by the applicant/community, and track record of the applicant.  Learn about the general review process or … Proposers are encouraged to review the JGI’s sample requirements . Samples that are …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … US National Science Foundation (NSF; grant PRFB IOS-1907220 to D.B.M.; grant MCB-1856143 to R.J.S.; grant DEB-1911459 to …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, …
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The JGI Data Portal: Improving User Experience
… download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only accessible via Phytozome, the improvements it encompasses are more broadly … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … are interested in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying … are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers …
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