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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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Environmental matrix and moisture influence soil microbial phenotypes in a simplified porous media incubation
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint … analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The … was supported by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … that seemed interesting and feasible to look into. These candidates would work well in further experiments, so she …
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton
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