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… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …

… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …

… in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … sequenced and assembled by the JGI. From these assemblies, complete or near-complete population genomes were …

… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and Oak Ridge National Laboratory, dating back to the first complete genome of a poplar tree in 2006. … This research …

… first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sequencing to assemble the repetitive areas of the complete sex chromosomes. The results were published in  …