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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and …
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Mateus Fiamenghi
… Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for … Brachypodium distachyon is a small annual grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. … support for user science and projects through implementation of advanced analysis pipelines and tools as well as …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … and up to 500 nonpolar metabolomic analyses.   Q:  Can a Scientist from India can apply for support? A: Anyone from … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed light on both when and how eelgrass …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … from the plants at the same time each week over the full life cycle of the plant. The first year’s gene expression …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix … with sufficient resolution to analyze their structure. Scientists found both a gene likely important for sex …
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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … determines when and where genes are activated to sustain life’s processes.  Traditionally, mapping this intricate … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living … the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological …
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