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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence … mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Roux …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … also analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … also analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … shrubby grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it … as multiple copies across the chromosomes. In a follow-up study , researchers focused on two types of naturally …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … Colorado State University researchers led a consortium to study river microbiomes. To understand the microbiology of … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even … temperatures characteristic for polar oceans. In this study, they’ve cracked open the genome of another polar … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …
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