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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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Worldwide Population Genomics Reveal Long-Term Stability of the Mitochondrial Genome Architecture in a Keystone Marine Plant
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Medicago root nodule microbiomes: insights into a complex ecosystem with potential candidates for plant growth promotion
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … field. Roux will be recognized at the 2025 ASM Microbe Meeting in Los Angeles, Calif.  Roux is also one of the lead … diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  …
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Learning to Look
… a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … virus group,” said virologist Mart Krupovic of the Institut Pasteur, one of the study co-authors and an expert on … co-infecting phages and with the host’s CRISPR-Cas immunity systems. Countering Co-Infections, Ensuring Host Survival …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… but it also requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the … insights into a vast range of organisms and ecosystems. These kinds of data could open opportunities along … scientific investigations of biological and environmental systems.”  The user facility’s new plan goes beyond …
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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