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Nikos Kyrpides
… Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of … 39:499-509. Harrington et al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 …
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP … metabolic pathways that could ultimately enable new or more efficient biotechnologies.  Below find a list of the …
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JGI Early Career Researchers Featured in mSystems Special Issue
… and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the … 2019 in Nature Communications , two research teams joined forces and data sets to describe bacterial genomes for …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP … year-round; the next deadline is July 31. You can learn more about our Community Science Program here .  …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… on science communication and technical writing while also making new connections with both researchers and other … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve … Tomoya Honda, Dung Mai Project:  Designing Synthetic Chemoreceptors for Neurotransmitter Sensing   Watch this short …
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An Automated Tool for Assessing Virus Data Quality
… in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … virus sequences vary widely. In a previous effort, an international consortium recommended specific …
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Crops as Tough as World Cup Turf
… and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, Guangchao Sun and Vladimir …
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Getting to the core of the gut microbiome
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Understanding Wildfire Recovery, Starting in Soil
… The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes … of plants and animals, but with climate change driving more extreme wildfires, more and more forests are under …
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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