The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
Results
Marine DNA methylation patterns are associated with microbial community composition and inform virus-host dynamics
IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
Constraining the oxygen requirements for modern microbial eukaryote diversity
Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
Characterization of digestate microbial community structure following thermophilic anaerobic digestion with varying levels of green and food wastes
Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress and challenges
