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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Hyperdiverse, bioactive, and interaction-specific metabolites produced only in co-culture suggest diverse competitors may fuel secondary metabolism of xylarialean fungi.
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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JGI@25: From Life at the Extremes to Editing Genomes
… The collaboration has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … with a conversation from another UC Berkeley colleague, longtime JGI collaborator Jill Banfield. "It was 2006, and I was … scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… campuses with this being our largest and most successful one. It’s proven to be a really good model for us that we … loved the opportunities that the program provides. He mentioned working with Elizabeth Dumont , Dean of the School of … Research Opportunity Center, echoed similar sentiments for the undergraduate interns. For him, it was a …
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Approved Proposals
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… can be used to create compounds more efficiently than one strain could on its own.  In work published in  … the CRAGE technology. Instead of only accommodating one DNA insertion, the new system, CRAGE-Duet, can … doubling the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , …
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A Grass Model to Help Improve Giant Miscanthus
… plants are diploids with two copies of each chromosome, one inherited from each parent. Some plants, known as … wild Miscanthus lineages to better understand the genetic diversity of the grass, which could help in optimizing … studying genes that are turned “on” or “off” at different times and in different parts of the plant, the team …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… program and current PhD student, reached this milestone with a recent publication in Molecular Biology and … during her summer internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor … in the biofuel and synthetic biology fields. In a living cell, triplets of nucleotides, or codons, dictate which …
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