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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. The planet’s microbial diversity … publications ,” emphasized Markus Göker, who managed the production of genomic DNA at DSMZ for GEBA-Actino and … address some of the most pressing challenges of our time. For more information, please visit  …
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DAP-seq Drives Robust Mapping of Gene Regulation
… advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … TFs and fragmented genomic DNA, eliminating the need for living cells. This allowed researchers to map regulatory … advance a fundamental understanding of genome biology and developing genome-scale engineering technologies to produce …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada … ecology. We also know little about where to collect the California Cone Snail  Californiconus californicus (and cone …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … an exceptional help in my summer project, whether it was developing my coding abilities or guiding me through …
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Game On: High School Students Drive Everglades Metagenomics Study
… out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got turned down … significant metabolic pathways related to methane production, nitrogen fixation, and dissimilatory sulfite … address some of the most pressing challenges of our time. For more information, please visit  …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Mapping the Earth’s Hidden Fungal Kingdom
… in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly 30 times older than … and Algal Science Program and JGI users have been at the forefront of tackling this enormous challenge, assembling … technologies. The JGI recognized this opportunity early, developing standardized workflows to produce high-quality, …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … — and their applications — are evolving. “JGI is famous for its work sequencing human and environmental genomes. But … chemicals, such as ethanol and acetone . To help reduce production of byproducts, the JGI DNA Synthesis Science …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Kjiersten Fagnan
… Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … focused on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s Office of Biological and … many more years of enabling clean energy and renewable production — and congratulated JGI on the anniversary. “This …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one … address some of the most pressing challenges of our time. For more information, please visit  …
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