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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … algae. But human-induced climate change , a new study suggests, is displacing these important cold-water … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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JGI-TMF Critical Minerals and Materials Call
… the Joint Genome Institute and the Molecular Foundry in one research proposal. The program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and developing … address challenges in the sourcing, recovery, and utilization of critical minerals and materials. For accepted …
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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JGI Early Career Researchers Featured in mSystems Special Issue
… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … and experimental approaches with the aim of eventually studying virus-host dynamics in nature. In the last few …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … and because anaerobic fungi can’t harness it, scientists long held that these fungi don’t have the energy to make …
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Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … hundreds of microalgae are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … existing methodologies developed for natural languages to study genomes,” Wang explained.  And since microbial genomes … Lab’s Computing Sciences Area to develop an efficient metagenome assembler capable of assembling many terabases of …
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How Microbes Can Protect Plants in Drier Straits
… proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to drought. …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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