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Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms
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Marine DNA methylation patterns are associated with microbial community composition and inform virus-host dynamics
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Ecological Assembly Processes Are Coordinated between Bacterial and Viral Communities in Fractured Shale Ecosystems
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Large differences in potential denitrification and sediment microbial communities across the Laurentian great lakes
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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An Automated Tool for Assessing Virus Data Quality
… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral … the completeness of these sequences and complements a community effort to develop guidelines and best practices …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric called …
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …
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