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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … machines to “learn” features. State of the art algorithms can perform astonishing degrees of feature recognition: for …
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Trent Northen
Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining … alignment of tandem mass spectra with statistical significance. SIMILE enables alignment of tandem mass spectra with … CL, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proceedings of the National Academy of …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a … efficiently remove carbon from the atmosphere than current natural processes and use it as a sustainable resource for … for well-performing CO2-fixing enzymes and other parts that can be further explored for novel functions. In the current …
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A thermostable Cas9 with increased lifetime in human plasma
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components … in the stomachs of livestock — are actually capable of naturally modifying lignin.  The Impact Traditional methods … be deconstructed without oxygen. Identifying the precise mechanisms by which these fungi break down lignin will …
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Genome Sequences of Alicycliphilus denitrificans Strains BC and K601T
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Complete genome sequence of Actinosynnema mirum type strain (101T)
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of … Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program that offered a … has mentored several of the students including 2018 intern Candace Cole, noted that “each year, they bring an …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research … al. 2016. Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. Nature … Member, Duke University (2018-2020) Section Head, Microbial Evolution & Genomics, F1000Prime Reviewer for major journals …
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101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens
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