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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities …
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Genome Insider
… The Genome Insider podcast brings listeners into the science … — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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Sequencing of Genomes from Environmental Single Cells
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY … The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're …
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Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …
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Natural Prodcast Episode 22: Alison Narayan
… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms
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Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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