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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …
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Natural Prodcast Episode 21: Elizabeth Parkinson
So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY … The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're …
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Natural Prodcast Episode 22: Alison Narayan
… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good …
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Project Management Office
… approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for … Planning Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …
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Genomic sequencing of single microbial cells from environmental samples
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Natural Prodcast Episode 9: Roger Linington
Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … advancement in sort of both areas. And I suspect that no single change will resolve the problem. But that stepwise … carefully at these as being candidates siderophores. Or for cell-cell signaling or for, you know, other other roles …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … in putting antibiotics together, getting them out of the cell letting them do their dirty work. So that’s one arm. …
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Natural Prodcast Episode 17: Cassandra Quave
… methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … and other natural product libraries, so not relying on single crystal X-ray diffraction, but looking actually at …
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