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A workflow for capturing the genetic make-up of specific uncultivated microbes from … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … remains unexplored and uncultivated. Developing a more targeted genomic approach would allow researchers to focus …

Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind … — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to …

The U.S. Department of Energy is committed to making its electronic and information technologies accessible to individuals with … 794d), as amended in 1998.   Send feedback or concerns related to the accessibility of this website to DOE Section …

… with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† Actual Operation = 69 …

A new view into a symbiosis could offer benefits to address climate … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …

A new view into a symbiosis could offer benefits to address climate … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …

Tracing gene regulatory networks in the model fungus  Neurospora … used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall …

… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …

… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …

JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … Lab). And one of the tools that researchers can apply to study the transcription factors that control how genes are …