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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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CSP Large Scale Call
… to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, and … clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. … All proposals will …
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Fungal & Algal Program
Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … program also explores microeukaryotic members of microbial communities, cataloging gene markers, and producing … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types …
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When “The Blob” Made It Hotter Under the Water
… event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers … one began in late 2013, when a large patch of warm ocean water about a third the size of the United States began … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral …
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Project Management Office
Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… have discovered flagella in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … small, it’s possible flagella would be a liability in open water — requiring more energy for the bacteria to orient and …
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Effects of Polar Light Cycle on Microbial Food Web
… microbial activity that dominates these polar environments greatly contributes to our larger understanding of carbon … producers fueling our planet’s biogeochemical cycles. Water samples from Ace Lake were collected over a 10-year … spiked to 83%, only to dramatically fall to 1% in early spring and rebound by the late spring. Preliminary …
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Synthesis
… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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