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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all …
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Natural Prodcast Episode 16: Marcy Balunas
… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Metagenome Program
… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … crops. One example is an ongoing collaborative effort to improve the emerging bioenergy crop switchgrass ( Panicum … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … year (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are increasing their yields … to extra chromosome and gene copies, will help researchers improve Miscanthus breeding programs. The team also …
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A pipeline for targeted metagenomics of environmental bacteria
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A single-cell genomics pipeline for environmental microbial eukaryotes
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Data Policy
Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user … Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science …
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Tour the IGB
… the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … and their roles in the environment, can unlock new avenues for bio-based products and bioenergy crop enhancement. The … resources by exploring the genetic pathways responsible for their synthesis. The Secondary Metabolites Program …
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