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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … This is due to the overreliance on a few species like Arabidopsis or rice as homology models for computational … We looked at the plant’s response in the aboveground and root tissues. The striking thing we found was related to …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal … 99.8% Q3 2026 175     2,164     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Arabidopsis C‐terminal binding protein ANGUSTIFOLIA modulates transcriptional co‐regulation of MYB46 and WRKY33
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Expression of a mammalian RNA demethylase increases flower number and floral stem branching in Arabidopsis thaliana
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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Two related families of metal transferases, ZNG1 and ZNG2, are involved in acclimation to poor Zn nutrition in Arabidopsis
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Engineered Root Bacteria Release Plant-Available Phosphate from Phytate
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Analysis of Leaf and Root Transcriptomes of Soil-Grown Avena barbata Plants
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Getting to the Root of Plant‐Mediated Methane Emissions and Oxidation in a Thermokarst Bog
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