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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling … activities using phylogenomic driven approaches, and understanding the design principles for successfully …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get back to a regular schedule. I’m … interested in this and have made tremendous advances in understanding how to harness the power of second metabolite …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, and … samples where people can go and reinvest time and effort in recovery.” The team plans to convene a discussion later this …
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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, …
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … like “Silent Spring” by Rachel Carson, and things about understanding the natural world and how we relate to that. … that we work on. The one thing that I’ve appreciated since starting my own group is these tools, in terms of looking at …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … terms of the definitions, such that everybody could have a understanding of what we’re talking about. And while … are natural to this complex, then we might have a better understanding of what is what. This is not new. It actually …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a master plan. And Tucson was a magical place for me as a starting faculty member. To start a lab. You know, all of my … in a laboratory. And so, for us, we’re fascinated by understanding the logic of nature and how it can control …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and … in fire-adapted ecosystems respond to low and high severity wildfire.  Eight of the approved proposals are led by …
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Natural Prodcast Episode 22: Alison Narayan
Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … JGI on, and those are ancestral protein sequences. And so starting from some of the enzymes that we had the most data … selectivity of the reaction. So that is what phase of the starting material that oxygen atom is going to be delivered …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … (BER), Brodie and his colleagues have been running a soil-warming experiment in the Sierra Nevada mountain range … PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding of the soil microbiome and its phenotypic …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most species … that is desirable in the microbiome field due to its high recovery of single-cell genomes. This is key to better …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** … 99.8% Q3 2025 175     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. …
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