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… in the field, you can probably skip straight on to Episodes 4 5 and 6, for some fun interviews, unless you want to fact … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … Secondary Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data … for microbiome data science, and the development of new informatics tools specifically optimized for … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… computational methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers Building upon these …

… and we wish her all the best. Later on, I’ll introduce my new co-host, who I’m really excited to be working with, and … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So …

… Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … you would just be within the chemists or just be within a group of evolutionary ecologists or something, so I think … yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and …

… in strain engineering and functional assays and supporting new methodologies to enhance the integration of various data …

… moved there in the early ’60s from Berkeley to work on this new budding field of marine natural products. And was at the university for over 40 years. There were four of us as kids in the family. I was … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . …

… this question, we have this discussion internally in my group quite frequently. OK, so imagine this sentence comes … that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh Alison … So I would say we run enzymatic reactions anywhere from 4 degrees to room temperature, to slightly elevated. We …

… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly …

… were a really common source for people to try to find new medicines for a long time. But we know now that most of … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … molecules and their discoveries over a stretch from 1940 to 2000. As you can see, from the 1940s, into the 50s …

… crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and … Critical Minerals and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to …