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… which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can modulate their behavior in the presence of other fungi. Poplar is a  JGI Flagship Plant , of interest as a …

… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …

… marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned … end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …

… mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … it’s a very long process in order to go from the first stage of discovery to a molecule that’s actually helping …

… (Neocallimastix californiae) on sorghum, switchgrass and poplar, then monitored changes to the plants’ lignocellulose …

… help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil …

… and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re … this complex species and also at the same time, take advantage of what we can do now with genomics to really make … common gardens in Texas. This reciprocal home site advantage is direct evidence of climatic adaptation. The team’s …

… sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, specifically for generating …