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Natural Prodcast Episode 24: Jackie Winter and SMC
… products but just different tools and how to really access and manipulate these pathways to get new compounds. … run them through, and they just have to sort of go into the pipeline for addition. So yeah. So it’s a big data … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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Natural Prodcast Episode 12: Nadine Ziemert
… around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been … of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, … ZIEMERT: A lot of groups working together, having a lot of samples, sequencing a lot of environments, varied with a lot …
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Rex Malmstrom
… high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing … the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of … ISME Journal 10 (7), 1589 Kashtan, N et al. 2014. Single-cell genomics reveals hundreds of coexisting …
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CSP Functional Genomics
… the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time … a simple web-based form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is …
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
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Insights into the single cell draft genome of “Candidatus Achromatium palustre”
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular … which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this … all plants, many bacterial cultures, and environmental samples auto-fluoresce, making fluorescent biosensors …
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scMicrobe PTA: near complete genomes from single bacterial cells
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Natural Prodcast Episode 9: Roger Linington
… to build The Natural Product Atlas , or NPAtlas, a freely accessible natural products structure database, which is … advancement in sort of both areas. And I suspect that no single change will resolve the problem. But that stepwise … carefully at these as being candidates siderophores. Or for cell-cell signaling or for, you know, other other roles …
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JGI Portals
… of DOE mission priorities. Data discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret …
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