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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
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Genomic sequencing of single microbial cells from environmental samples
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … and take soil and discover a new important drug from the microbes in that soil, there are now international … and other natural product libraries, so not relying on single crystal X-ray diffraction, but looking actually at …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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scMicrobe PTA: near complete genomes from single bacterial cells
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four … In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation …
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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