Results

Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National … (JGI), presented on generating vector representations of proteins in order to conduct more efficient protein sequence … proteins to become much simpler; instead of aligning sequences with popular, but computationally costly …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … of natural products from invertebrates, mostly. Dan Udwary: Structure elucidation, yeah. Kate Duncan: Right, yeah, so … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tāpirins) from Extremely Thermophilic Caldicellulosiruptor Species.
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Transfer RNAs with novel cloverleaf structures
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Population structure of an Antarctic aquatic cyanobacterium
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Structure, function and diversity of the healthy human microbiome
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A Genome-Wide Survey of Switchgrass Genome Structure and Organization
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Toward a standard in structural genome annotation for prokaryotes
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Identifying candidate structured RNAs in CRISPR operons.
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