Search

… of natural products from invertebrates, mostly. Dan Udwary: Structure elucidation, yeah. Kate Duncan: Right, yeah, so … there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to make the biofuels … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … Data Collaborative (NMDC). … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn … Microbiology, Microbiome ; NSF Division Of Biological Infrastructure Program; NSF Postdoctoral Fellowship Program; …

… us to uncover globally distributed molecules with conserved structures, offering fresh insights into DOM's composition. … are able to test hypotheses concerning specific molecular structures involved in DOM cycling. ENVnet can be used in …

… families known up until now, and identified many novel structure predictions,” said lead author on the paper … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists …

… they’re complex, they have different tissues, different structures, different spores. I like looking at that I’m a … species”… he’s now found that some fungi have different ITS sequences in their genome, which might get you a little … look at these enzymes and predict, and really place it to structure. There’s still no way to do that.    DAN: Yes. …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may … can specifically scan for those snowflakes, or RNA virus sequences. Using this workflow, the team combed through more …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database … of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …