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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … Episode Transcript … of genome mining, the science of examining DNA sequence to try and predict the structures of secondary metabolites …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the … Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …
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Unexpected host dependency of Antarctic Nanohaloarchaeota
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of … algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is … Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … Episode Transcript … work with actinomycete bacteria, then you absolutely need to know about, and contribute to ActinoBase.org . It’s a …
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Community Science Program
… provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to … will be chosen based on scientific merit, judged through independent peer review, and evaluated based on their DOE …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome … of secondary metabolism. Hey there, and welcome back to Natural Prodcast, and this will be episode 11. This … Episode Transcript … In this episode, Alison and I talk to Marnix Medema, from Wageningen University in the …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code throughout the entire event. All participants are …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by better understanding the capabilities and … here . You can find additional webinars covering how to use our data portals here.  …
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