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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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Rapid cell-free characterization of multi-subunit CRISPR effectors and transposons
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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AlloSHP: deconvoluting single homeologous polymorphism for phylogenetic analysis of allopolyploids
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 …
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Products
… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle … assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA …
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … as needed), and the work plan is written into a Statement of Work document. …
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Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons
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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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