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… computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… microcosms can be designed and studied in  EcoFABs as a synthetic microbiome.  Here, a controlled environment of … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …

… discoveries being made, and then connecting that to biology was pretty darn exciting. So that was this era of … or out of the ocean. Going to the laboratory and opening them up and looking at their chemistry was a pretty … Alison: I heard about petroleum products being a basis of synthetic chemistry, but, you know, it’s kind of weird, like …

… interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural Products meeting … science to to get a point where we can predict an enzymes synthetic capabilities. Also, along the way, I declared a … a few years out, coming from a chemistry background, open up sigma catalog, you can pick out which reagents you …

… the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls … (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner institutions. … DOE priority areas of Feedstock Development, Conversion, and Sustainability. Center for Bioenergy Innovation …

As much as we incorporate loads of different kinds of biology, one of the best things that we do is work with this … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … in natural products is that we don’t know what all the biosynthetic gene clusters look like.  DAN: For sure.  MARCY: …

… (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes … made it possible to confidently assign species to nearly 326 genomes. Through the analysis of cliques, it has also … and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists worldwide for the annotation, analysis, …