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Metagenomic and Metatranscriptomic Analyses Revealed Uncultured Bacteroidales Populations as the Dominant Proteolytic Amino Acid Degraders in Anaerobic Digesters
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … there. So, check out the show notes, and I’ll put up some structures and link to some resources you can use to get … in the past. And the natural products taught us fundamental structures, fundamental biology, fundamental medicine. And …
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The Exometabolome of Xylella fastidiosa in Contact with Paraburkholderia phytofirmans Supernatant Reveals Changes in Nicotinamide, Amino Acids, Biotin, and Plant Hormones
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … with genomic data to gain insights into how small molecules function within plants, microbes, and ecosystems. … us to uncover globally distributed molecules with conserved structures, offering fresh insights into DOM's composition. …
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High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … ) The following tools are available for functional annotation/curation of your genomes Microbial … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … A lot of these moving parts are proteins — amino acid structures that harvest light, transport molecules and …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … get to say that six of those are based on natural product structures.  DAN: One of the things that keeps me awake at … what those molecules actually are, and then what their function might be. Whether that’s in nature, or whether …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science … as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission … FICUS Example #1 … FICUS …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the modulation of their … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … analysis Relative abundance profiling of polar (e.g. amino acids, nucleosides, etc) metabolites using normal phase …
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