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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … rich, and you can really just learn so much, which then enables you to ask bigger questions and accomplish bigger, … that, but on– DAN UDWARY: On a big scale. ALISON NARAYAN: –massive scale, and then we’ll have that information for …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … potential of hard-to-culture microorganisms. This process enables our users to explore the genetic makeup of microbial …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … and hundred thousand fungal strains, that will generate a massive amount of data that current technology has never …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop … Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any … a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … a solution that bolsters the immune system of oaks and enables them to fend off the effects of infections. As SOD …
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Tandem termination signal in plant mRNAs
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Community Science Program
… Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Single-cell genomics for the masses
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries and … materials. The proposal submission deadline is March 31, 2026 .  …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. …
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