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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … new. And that is to begin to study the organic chemistry of life in the sea. And he looked at me and he said, you know, … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, …
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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our core …
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A new view of the tree of life
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Natural Prodcast Episode 24: Jackie Winter and SMC
… not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … The fungus is almost always found among and within poplar trees, and in an effort to understand its influence on the … (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … Martin that contributed toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. …
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Searching for new branches on the tree of life
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Evolution of a Fungal Gene Expression Regulator
… on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species of … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes … Core (GGBC) at the University of Georgia provided sequencing and computational resources, respectively. This …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we talked about sponges, go pull a sponge or extract some tree bark. And so you’re just taking something, you’re … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences …
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