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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help …

… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … after polyploidization,” said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on … natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. A primary …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … The UEC represents the JGI user community and is responsible for providing input … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. …

… to find info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these … Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae …

… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to … drive biotechnology and biomanufacturing innovation. The JGI contributes to this mission by enabling large-scale …

… NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the … it’s really about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… The Synthetic Biology lab is divided into a DNA synthesis … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …