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How to Target a Microbial Needle within a Community Haystack
… developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … would allow researchers to focus on specific microbes within metagenome samples and associate their sequences with …
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FICUS Overview
… of capabilities. Previously, researchers had to apply to each facility with separate review schedules and selection … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 16: Marcy Balunas
… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … the organ but do they all sort of get evenly distributed on each egg?  MARCY: So you are definitely jumping into the … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship … ultimately, an understanding of the JGI’s role in enabling complex biological and environmental systems research.  … The CalTeach Summer Research Institute (SRI) at UC Berkeley is a … foster a profound understanding of research methodologies within the realm of education. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … atmosphere, a lot of new people learning new things from each other. It was the best that I think natural products … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership … BER's mission of achieving a predictive understanding of complex biological, earth, and environmental systems for … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Natural Prodcast Episode 19: Bill Fenical
… it did. And of course, we now know that the ocean is as complex or even more complex, chemically, than any of the … that the molecules out there would be toxic to cancer cells. And that started something big. Because at that time, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … requires completion of work on all approved proposals within 36 months from the approved start date. Additional …
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with … For general questions, please reach out to Christa Pennacchio, Project Management Office. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… University on graduate student mental health, and an outreach program to get kids interested in microbiology and … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … these hormones actually oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are …
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User Executive Committee Charter
… community and promotes communication and collaboration within the user community. UEC responsibilities include: … are held annually with one-third of the seats being filled each year. Anyone can nominate, but only users active in the … year can vote or be elected. Voting is electronic and each user can vote for as many candidates as there are …
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