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Natural Prodcast Episode 19: Bill Fenical
… increasing our ability. And ultimately we went through a whole lot of different processes with plants and animals, … normal cells, particularly your hair cells, which are also rapidly growing, the cells in the mucosa lining of your … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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IMG Group
… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes …
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FICUS Overview
… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and interesting biosynthetic pathway, and I’ll have to do a whole show on it one of these days. If you listen to the … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … identifying genes to that toxin, but it’s opened up this whole area of environmental health that we’re now working … you use that to do? Brad: Yeah, absolutely. You know, we’re using it as a way to be able to better predict when a toxic …
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Scientific Advisory Committee
… include providing technical input on large-scale production sequencing, new sequencing technologies, and related informatics; overview of the …
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Viral Genomics Group
Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Special Initiatives & Programs
… for user proposals . … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to … and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours … 2,164 2,208 102.0% *Includes Illumina NovaSeq, Illumina NextSeq, Illumina MiSeq, and PacBio sequencing platforms. … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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Plant-Microbial Interactions Group
… host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and computational approach, we … importance. … We are using cutting-edge single-cell profiling methods, including single-cell RNA-seq, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … or phenotype of interest, prior to and in conjunction with whole genome sequencing. … Jean-Marie Volland: Assistant … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … finding new sources is somewhat problematic. And there’s a whole process to this, that can be really time consuming … to your extract and try to purify the molecule that’s causing that test to be successful. Right? Because we don’t – …
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